Raimon saw how Raimon's soccer building demolished. After that, they are going to the future and are infiltrate the soccer museum in the future to steal the Scriptures of the Champion to create the strongest team. They find the the book but the alarm is a problem. Tenma tried to get the book but he got touch by the alarm and the alarm goes off. Then they got a soccer battle with the Security Robots and Raimon won with 1-0. After that, they went back to their timeline and went to Tenma's house.

Raimon is looking at the Scriptures of the Champion but they can't figured out what is wrote in the book. Then, in El Dorado's headquarts, Protocol Omega 2.0 is seen, with Beta talking to Toudou about what Einamu and the others did. Toudou was about to send them to the Eternal Prison when Beta stopped him, saying they should give a chance to Einamu and the four others members of Team A5.

Raimon arrived in the Sengoku time and they are searching for information about Nobunaga. Shindou met Okatsu and Okatsu brought Shindou to her house for a talk. Tenma, Shinsuke and Aoi saw some boys playing soccer and Tenma and Shinsuke decided to join. When they lost the ball and a boy wanted to pick up the ball, two guys kidnapped the boy but Tenma stopped the two guys with the ball. The two guys wanted to attack Tasuke and Tenma but Kinoshita stopped them. Okatsu threw some water at Shindou.

Raimon must play against Team White Deer to free Tasuke and the others who were captured. AtShinsuke stopping the shot.

Raimon got arrested and Shindou explained to Nobunaga that they come from the future and that Nobunaga will not rule in Japan, which shocked everyone. Tasuke and his friends are learning soccer in order to play against Protocol Omega 2.0. Shindou is trying to get Keshin Armed and almost succeeded. Tasuke, Shishimaru and Gorouta are trying to create a block hissatsu, called Ichiyajou and Raimon is about to play against Protocol Omega 2.0.

The Raimon's brainwashed members came back to the soccer club. There is also a new member called Nanobana Kinako, who said she's Raimon's ace striker as she won a striker battle against Tsurugi. Shindou showed his ability to mixi max with Nobunaga, which surprised Raimon's members. Daisuke said that they should take the aura from Jeanne d'Arc. The next morning, Kariya said that Kirino was jealous on Shindou because he had a Keshin, can use Keshin Armed and can use Mixi Max. Daisuke selected eleven members of Raimon, but Kirino wasn't. Kariya offered his place to Kirino and Raimon went to Jeanne's era, at 1427. Zanak Abalonic escaped from the Eternal Prison. He met Protocol Omega 3.0 at Jeanne d'Arc's era, beat them and took control over them.

As Raimon arrived in the medieval France era, they got surrounded by knights who believed that they were spies. Then, Jeanne d'Arc appeared and Shindou told her that they came from the future. Jeanne gave Raimon candy and brought them to her castle. During their stay there, they played soccer to pass time. Wonderbot then tried to Mixi Max Kinako with Jeanne but failed. In the afternoon, Jeanne asked if Raimon will help her and Kirino agreed.

Jeanne d'Arc and the others arrived at Charles palace. Kirino and Jeanne went inside while the others were outside playing soccer. Charles agreed with sending more soldiers for the war. Jeanne and the others went back to Shindou and the others along with the soldiers. Jeanne and Kirino had a talk about the war. Jeanne went outside and fought against the enemies. Kirino thought it was his fault and he ran outside, the others followed him. Zanak created a soccer field and Raimon must fight against Protocol Omega 3.0 in order to proceed. Gamma released his Keshin and scored the first goal. Jeanne is scared and Kirino is worried about her.

Raimon was seen training in the soccer building. Amemiya Taiyou appeared and told about his recovery and that he already knew what Raimon was doing. Gouenji appeared with a new artifact and Daisuke selected eleven new members and those members went to The Three Kingdoms era. There, they saw Ryuu Gentoku with a canon. Raimon and Ryuu Gentoku walked to a building and Zanark brainwashed Chouhi and Kanu. Three members of Zanark Domain challenged Raimon in a soccer battle with Chouhi and Kanu at their side. Shindou, Tenma, Tsurugi, Kinako and Ryuu Gentoku were seen playing in the battle. But then, Ryuu Gentoku left the goal open and shocked all the members of Raimon.

Raimon resumes the soccer battle against Zanark Domain. Shindou blocked the shoot in order to save the goal. Raimon won the soccer battle with 1-0. After that, they advanced their journey to search Shokatsu Koumei. They must proceed the challenge that Shokatsu Koumei has made. After that, they have to play soccer against Terracotta. Ryuu Gentoku was placed as goalkeeper and Shinsuke said that he have to defend the goal. After some shoots that Ryuu Gentoku has blocked, he injured himself with blocking the shoots without a hissatsu and Shinsuke replaced him. Shindou and Kirino helped Shinsuke to defend the goal. Ryuu Gentoku encouraged Shinsuke and Shinsuke used Buttobi Punch. At the end, Raimon won with 2-1 and they met Shokatsu Koumei.