Ensign Tendi has her first day of work on Starfleet's USS Cerritos, where she meets fellow support crew members. Boimler is tasked with a secret special assignment. Rutherford attempts to keep his dating life intact while a disaster strikes the ship.

Ensigns Boimler and Mariner embark on a shuttle mission to a Klingon compound while Ensigns Tendi and Rutherford spend time together back on the USS Cerritos.

Captain Freeman seeks the ultimate payback after Mariner blatantly disrespects her in front of the crew. A well-meaning Tendi accidentally messes up a Lieutenant's attempt at spiritual ascension and tries to make it right.

Ensign Boimler welcomes his girlfriend Barb onto the USS Cerritos, much to Ensign Mariner’s dismay — while Ensigns Ruthford and Tendi have starship envy when the Cerritos rendezvous with the more-advanced USS Vancouver.

The lovable but awkward Ensign Fletcher makes work difficult for Mariner and Boimler. Rutherford introduces Tendi to a holodeck training program he created.

Mariner tries to impress her best friend from Starfleet Academy who is now a visiting Captain. Boimler is sent to a Starfleet medical ship after a transporter accident puts him “out of phase.”

Mariner, Boimler, Tendi and Rutherford are caught off guard when aliens force them to testify about a series of seemingly unrelated events.

Mariner repurposes Boimler's holodeck program to cast herself as the villain in a Lower Decks style movie.

The USS Cerritos encounters a familiar enemy. Tendi helps a struggling recruit find her footing.

Our Lower Deckers have trouble bonding with Ensign Jet Manhaver, who has been assigned Boimler’s bunk and shift duties. Meanwhile, we get a glimpse of Boimler’s life on the U.S.S. Titan, which is more intense than he thought it would be.

The U.S.S. Cerritos is dispatched to a planet to investigate an unexplained sighting of a dangerous Mugato.

Anomaly consolidation day on the U.S.S. Cerritos leaves the Lower Deckers with mixed emotions. Captain Freeman attempts to negotiate peace on the Pakled home world.

A consultant arrives on the U.S.S. Cerritos to run drills that require the lower deckers and bridge crew to swap duties.

In the season two finale, the U.S.S. Cerritos is tasked to aid another class starship on a first contact mission.