The Hidden Leaf Village is located within the Land of Fire, one of the Five Great Shinobi Nations. Boruto Uzumaki lives here and he's the son of the village leader, Naruto Uzumaki, the Seventh Hokage. One day, Boruto saves a boy named Denki Kaminarimon, who's being picked on. Denki is physically weak, so he is unable to stand up to the bullies. On his way to the entrance ceremony at the Ninja Academy, Boruto sees Denki again. He notices that his chakra is warped and that he is acting strangely.

Cho-Cho's scared because she thinks she's being watched by someone, so she decides to catch them in the act. She succeeds in snagging Magire Kakuremino, and it turns out he wasn't watching Cho-Cho, but Sumire, the class rep, whom he secretly likes. Cho-Cho urges him to declare his love, and at first Magire hesitates. But he takes the leap and tells Sumire how he feels!

Determined to rescue Sakura, Sarada pursues Shin with Sasuke, Naruto, and Cho-Cho. After brutal battles with Shin's clones along the way, Sarada is surprised to see the bond of trust between Sasuke and Sakura, who haven’t seen each other in years. But suddenly, Shin orders his children to kill the intruders. Since her parents share a bond of trust and love, will Sarada's journey to learn the secret of her birth reach a conclusion?

Boruto urges his friend Kagura to return with him, but Kagura rejects him and begins to attack. Although Boruto is desperate to save him, Kagura once again falls under a spell and is unable to defy Shizuma. Then someone steps in between the two as they battle. It's Mitsuki, and he has obtained intel about the rebellion. Just what is the intel, and can Boruto save his friend?

Naruto and Sasuke fight against Momoshiki Otsutsuki. Momoshiki gets defeated, but he's helped by Katasuke and his Scientific Ninja Tool. In the end, Boruto puts an end to Momoshiki's life. While dying, Momoshiki talks to Boruto and gives him the Karma Seal.

Metal's father, Rock Lee, announces that he will train Metal to master the ultimate taijutsu technique, the Eight Inner Gates. The thought that he cannot fail this training fills Metal with anxiety, and he ends up buying an item that's supposed to calm his nerves. But it doesn't work, and his father ends up postponing the training. He then runs into Might Guy, his father's mentor and a hero of the Fourth Great Ninja War.

Kakou appears to take the former Tsuchikage back to the village, but Boruto confronts him and they fight. Kakou uses a rare and powerful Particle Style and pushes Boruto to the edge. Meanwhile, Shikadai manages to slip through the Akuta guards and heads for the Hidden Leaf to report on the situation in the Hidden Stone.

Jugo is suffering from the effects of the drug that activates the power of the cursed seals. Somehow or another. Boruto and Suigetsu want to try to save him, but they are rendered unable to move because of being injected with a tranquillizer. Meanwhile, it’s time for the migratory birds to set off.

Boruto's quick thinking exposes Urashiki's trick that enables him to see into the future and they manage to inflict some damage. But before they can breathe a sigh of relief, Urashiki emerges again with an even stronger move, and they're back in the same predicament!

Boruto and the others learn that the boy named Kawaki is the target that Kara has been seeking. They watch on as a battle rages between Kawaki and the Kara Outer, Garo, and are shocked by the young man's capabilities.

Naruto and the others are exhausted from their battle with Isshiki. Suddenly, Boruto attacks Sasuke. Momoshiki has taken control of Boruto’s consciousness and stands before them as an enemy. Kawaki desperately calls out to Boruto to snap him out of it. Unfortunately, his words are unable to reach him. Sasuke tells Kawaki a way to bring back Boruto’s consciousness. In order to save Boruto, Kawaki attempts a risky plan using a jutsu he only recently learned. While Kawaki and Sasuke fight a desperate battle, Naruto finally runs out of strength. As his consciousness fades, he and Kurama quietly reminisce about their past.

Sasuke is attacked by Meno, the guardian of the Observatory, and then poisoned. Just when he thinks it’s all over, he is rescued by Sakura, who has infiltrated the Observatory as a doctor. She gets Sasuke reassigned to assist her, and they begin their undercover investigation. From the intel that Sakura brings, they learn that Ultra Particles were what cured the Sage of the Six Paths, but in order to find out where it is located, they need to obtain a document called the Map of the Heavens. They decide to search the Observatory’s library for it.

Amid a fierce battle, Kawaki’s fears come true, and Momoshiki takes control of Boruto. Kawaki watches as Boruto overwhelms Code as Momoshiki. Then Naruto arrives with Shikamaru. Kawaki is concerned for Naruto’s safety as one of Code’s targets, but despite his wishes, Naruto takes on Code as the Hokage. Unfortunately, Code takes Shikamaru hostage, and in his desire to settle his grudge, Momoshiki joins him. Naruto faces an extremely dangerous situation.