Gordon takes matters into his own hands when he travels to Miami in attempts to persuade Carmine Falcone for his help in the fight against Penguin. There, he meets Carmine's daughter, Sofia, who unexpectedly follows Gordon back to Gotham. The battle for Penguin's prized weaponry continues during auction night at the Iceberg Lounge and Bruce's presence puts him on Penguin's radar.

Bruce Wayne puts the lives of Gotham Natural History Museum historian Niles Winthrop and his grandson, Alex, in danger in an attempt to uncover the meaning behind his prized knife from the auction. Meanwhile, Ra's Al Ghul proves he'll take deadly measures to achieve what he wants. Also, with Sofia Falcone in town, she is on a mission to win back Gotham from Penguin.

Nygma comes face-to-face with Butch Gilzean, but he is not who he used to be. In an attempt to regain power and identity, Nygma decides to put his former partner's skills to the test. Meanwhile, Sofia Falcone takes action to protect her own life by appealing to Penguin's vulnerable side. With the power of the dagger in his possession, Bruce surprises those around him with his bold actions.

Gordon and Bullock are hot on a serial killer who has been assassinating cops and dressing his victims in the severed heads of pigs as his signature mark. Meanwhile, Sofia tries to win over Penguin, and Thompkins, Nygma and Grundy find themselves an unlikely home at Cherry's place.

With Professor Pyg striking fear throughout Gotham, Gordon and Bullock head into the Narrows to look for clues. Bruce Wayne meets a former friend, Grace, who convinces him to come along for a night out with some old classmates. Meanwhile, Sofia's relationships with Penguin and Gordon continue to evolve.

Grundy and Nygma become main attractions at Cherry's Place in The Narrows. Penguin wants revenge when he hears Nygma is mocking him on stage and enlists The Sirens for help. Meanwhile, Gordon is offered the position of GCPD Captain, putting him at odds with Bullock.

Professor Pyg continues to torment Gotham city, involving Jim Gordon whenever possible. Sofia and Penguin get ready for a fundraiser for the orphanage, and things don't go as planned when Professor Pyg shows up as the chef. Meanwhile, Bruce's partying gets in the way of his relationship with Alfred.

Gordon tries to broker a deal with Penguin that involves Sofia. Meanwhile, Alfred tries to pull Bruce out of his teenage-angst and downward spiral, as Lee Thompkins gains more control over the Narrows.

Things get complicated for Gordon, Sophia and Penguin when Carmine Falcone comes to town. Alfred tries to get through to Bruce once and for all, while Nygma struggles to gain control over The Riddler persona and Tabitha attempts to make Grundy remember his past.

Ivy tracks a secret project on which Wayne Enterprises is working and begins to target anyone that can give her information. Meanwhile, Jerome becomes obsessed with Penguin in Arkham. Also, Gordon begins to second guess his deal with Sofia and an unsettling dream sequence shakes up Bruce.

Ivy picks her next target, leading Gordon and Lucius back to an old friend, as Selina tries to take matters into her own hands. Sofia wants full control of Gotham and turns to Lee about the state of the Narrows. Meanwhile, Bruce tries to make amends with Alfred, and Nygma visits Arkham.

Bullock and Gordon try to track down someone who is key in Sofia's control over Gotham. Meanwhile, Penguin, Lee and Nygma enlist an unlikely ally as they seek revenge, and Selina asks Bruce for a favor to help rid her of her guilt over Ivy.