Having been transported to the Fortress of Solitude, Clark is confronted by Jor-El, who tells him he cannot return to Smallville, instead he must stay and prepare to save the planet. Also, transported to the Fortress, Chloe is unable to handle the sub-zero temperature and collapses, begging Clark to use his powers to save her. Jor-El forbids him to leave, but finally acquiesces, telling Clark he must return before sunset or there will be dire consequences. Meanwhile, Lana is horrified when she sees two Kryptonian aliens emerge from a spaceship discovered in the remnants of the meteor shower. The two aliens destroy what's left of the town searching for Kal-El.

Jor-El strips Clark of his powers, making him human. Delighted to finally be normal, Clark pursues a relationship with Lana sans secrets. However, after Lana, Jonathan and Martha are taken hostage by three thugs, Clark must figure out how to save his family without his super powers.

A krypto-mutant, Gabriel, hacks into missile codes and prepares to eliminate krypto-mutants in Smallville once and for all. A powerless Clark confronts him and is shot, and only Jor-El can save him.

At a party at Crater Lake, Lois is saved from drowning by Arthur "A.C." Curry. Arthur has incredible swimming abilities, but also a secret agenda aimed at...Lex. Meanwhile, Professor Fine discussed Lex's weapons-manfucturing operations with Clark.

Lana joins a sorority to get housing for her last-minute college registration, but the sisters have a deadly agenda which involves turning Lana into a vampire like themselves and sending her against Clark. Meanwhile, Chloe applies to become an intern at the Daily Planet and runs up against the editor-in-chief, Pauline Kahn.

Jonathan's oldest friend, Senator Jack Jennings, comes to Smallville looking for support in his re-election campaign, but is framed for the murder of his mistress, requiring Lois to go undercover as a stripper.

Clark gives into paranoid delusions brought on by exposure to new "silver" kryptonite, and Professor Fine is the only one who can save him... before he kills Lana.

When Martha comes down with a strange disease, Professor Fine convinces Clark that Jor-El is responsible and that the Fortress must be trying to eliminate the father of Kal-El. But Professor Fine has an ulterior motive which comes to fruition when they arrive.

Lex is given an envelope with damaging information that will destroy Jonathan's life and must decide whether he will use it as it will also bring harm to Clark and Martha. Before he can decide what to do, Lex is shot and falls into a coma. He dreams that his mother visits him and shows him the life he could lead if he walks away from his father and LuthorCorp. In this alternate life, Lex is happily married to Lana with a baby on the way. Meanwhile, Chloe asks Clark to use his powers to deliver Christmas presents to needy kids.

The Senatorial race between Jonathan and Lex heats up when Jonathan receives an anonymous threat warning him to drop out of the election. When Clark finds Jonathan badly beaten he determines to find the attackers. Lois is thrown into the mix when she is captured and she is forced to assassinate Jonathan during his speech.

Lex and Lana are at the mercy of a deranged Smallville deputy who plans to keep them captive until Lex reveals the location of the Kryptonian spaceship. Meanwhile, the Kents can't see eye-to-eye on campaign financing.

Clark reveals his secret to Lana, Jonathan and Lex learn the results of the senatorial election, and there is a tragic car accident on the highway that takes the life of someone Clark loves, forcing Clark to appeal to Jor-El for help.

Clark discovers that the new assistant at the Daily Planet, a bespectacled, bumbling woman named Andrea, is actually a mysterious female vigilante who stalks Suicide Slum. Her path crosses Clark's as they both seek the same criminal. Meanwhile, Clark's bottled-up grief threatens to get the best of him and LuthorCorp experiences a shakeup.

Chloe is possessed by the spirit of a young girl whose body is sealed in the Talon's walls, and goes searching for the girl's killer while Clark and Lois try to track her down.

Clark finds himself up against Lex when he befriends Victor Stone, a half-machine, half-human subject who escapes from LuthorCorp with the aid of a sympathetic doctor.

Clark is hypnotized by a woman who uses a supposedly magical charm to control others - he reveals his super powers and is sent to kill Lex. Meanwhile, Lex has tracked down the missing Professor Fine and plans to confront him, unaware that Clark is coming to murder him.

Distraught over her break-up with Clark, Lana goes to a rogue medical student who experiments with a dangerous kryptonite-based serum that allows people to flat-line but see their dead loved ones. Lana attempts to see her dead parents using the serum and when Clark returns from Honduras to help her, the doctor injects him with the serum and Clark speaks with his dead father...who warns him that Lionel knows his secret. Meanwhile, Lionel continues working to get closer to Martha, and Lex has a near-death vision of his mother.

Clark befriends a little girl who has the ability to telekinetically shatter glass, then comes to her aid when it's believed she killed her mother in a brutal stabbing attack. Meanwhile Lex and Lana grow closer together and Chloe finds out about it.

Lionel is taken hostage by a masked man who forces him to play elaborate games for the prize of staying alive. Martha goes to confront Lionel after Clark tells her Lionel knows his secret and becomes a part of the game herself, fighting for her life.

Clark saves a man who in gratitude decides to help Clark in return...by using his ability to turn invisible and his skill as a hitman to kill Lex so Clark can reunite with Lana. And Clark and Lana finally square off about Lana's new relationship.

Clark and Martha are both visited by Jonathan's ghost, who warns them about Lionel and claims that Clark must kill him to stop him. Meanwhile Fine will do whatever it takes to get the vaccine from Lex.

Professor Fine has unleashed a virus that will kill millions. Clark must put a stop to him, while Lex wonders what happens when he will tell Lana his newest secret.

A powerless Clark is trapped in the "Phantom Zone" surrounded by the criminals his father imprisoned there. However, an unexpected ally comes to his aid. Meanwhile, Zod in Lex's body advances his plan to transform Earth into a new Krypton, while using Lana to produce an heir.

In the aftermath of Zod's activities, Clark develops a new power. Lois gets a new job, Lana takes a new step in her relationship with Lex, and Lex has to deal with a new danger. Meanwhile, an old friend of Lex's arrives in Metropolis.

Clark and Chloe pursue a plant creature that uses male humans to recreate, one which has taken Jimmy Olsen as its next human breeding ground. Meanwhile, Oliver Queen asks a reluctant Lois to be his date at a charity ball held by Lex.

The mysterious Green Arrow steals a necklace from Martha, and both Lois and Clark resolve to find out who the vigilante is. While Clark determines Green Arrow's true identity, Lex continues his investigation of the mysterious black box while Lionel warns Lana against him.

Lex and Oliver Queen return to their old prep school for a reunion, but Oliver's old friends (and Lex's old enemies) start dying in mysterious accidents. Meanwhile, Clark learns that someone... or something may have left the Phantom Zone with him.

After escaping from the Phantom Zone, Raya comes to Smallville to visit Clark. Raya and Clark grow close, and Raya reveals how to repair the Fortress of Solitude. Unfortunately, Baern, another escapee seeks out revenge on Clark and Raya for his time spent in the Zone.

After being shot while stopping a carjacking, the Green Arrow begins acting strangely. Chloe and Clark investigate and find Oliver is taking a super drug that while healing his wound, has some dangerous side effects.

One of the escapees from the Phantom Zone has killed the crew of a ship in Seattle. Clark confronts the killer who feeds on the bones of his victim. In Smallville, a patient in LuthorCorp Labs escapes experimentation and seeks revenge on Lex by trapping him in a dimension where he can see and hear those around him, but they cannot see him.

An illegal immigrant comes to Clark for help, escaping from a nearby farm where he's working... a farm that houses a dark secret.

A Daily Planet gossip columnist uses her special power to overhear a conversation between Lana and Chloe, and publishes the conversation... where Lana admits having doubts about marrying Lex. While Chloe investigates the reporter, Lois asks Clark to help her investigate the mysterious Green Arrow bandit when she suspects he may be Oliver Queen in disguise.

When Lex's Level 33.1 project comes to fruition, Oliver Queen must bring together several of Clark's "heroic" super-powered allies together: Arthur Curry, Bart Allen, and Victor Stone.

Clark is in his barn one moment... and the next finds himself in a psychiatric hospital where he discovers he's been suffering from delusions that he came from another planet and has super-powers.

Clark is once again exposed to red kryptonite, and his "other self" goes on a rampage of sorts on Valentine's Day, kissing the women he's most attracted to and expressing his uninhibited feelings for the various relationships around him.

Lana has a stalker which leads her to an unexpected hideout. Also, Chloe has to reevaluate her feelings for Clark after she and Jimmy break up due to Jimmy's belief that she isn't really over Clark.

A boy named Tobias was blinded by the meteor shower but given the ability to identify other meteor freaks. Lex is using Tobias to locate other people with abilities so that he can perform experiments on them. Lana learns of Tobias and is fearful that he will name Clark as a freak, so she offers him a cornea transplant to keep him quiet. But Tobias has some surprising news.

Clark has second thoughts about Lana marrying Lex, and Lana has the same concerns. Meanwhile, the doctor involved in the secret behind Lana's pregnancy threatens Lex with his knowledge.

Clark and Chloe find an escaped Zoner named Titan who is the star of a secret fight club that puts its death battles on the internet. Lois can tell that there is a story and goes to investigate, where she is put in the ring to fight. Clark goes in as a super-powered fighter to take on Titan but ends up against a different opponent instead.

Lex discovers that Chloe's mother has special abilities and forces her to help him in exchange for Chloe's life. However, she has a trick or two of her own to use to escape.

Lex and Clark get a chance to hash out their differences... when they're both trapped in a cave after an explosion, and Clark is unable to get them out without revealing his powers.

Lana and Lionel have a secret meeting, after which Lana is shot. While Jimmy is observing photos of the encounter, he is knocked unconscious. While unconscious Jimmy dreams about what life in Smallville would have been like in the 1940s. Clark is a reporter at the Daily Planet, Lana is a siren who planned the demise of her magnate husband Lex, and Lois is a singer at a bar that Lionel owns.

Lex tries to turn a soldier that supposedly died in Afghanistan into a "super-soldier." A senator threatens to tell the world about Lex's labs, prompting Lex to send the "soldier" to kill the senator. Lois sees the attack and becomes the soldier's next victim.

Clark discovers the reason Lana married Lex then and sets out to kill Lionel. Lex tries to use DNA from the last phantom to power his super-soldiers. Lois goes to a dam to search for Lex's lab but is caught by a security guard and fatally injured. Chloe's power is discovered.