Bayliss and Pembleton continue to struggle with the Watson case. Bolander and Munch discuss ""iguana style"" and are called to check out the homicide of a victim that isn't dead, at least the first time they're called. While checking out some leads for the Watson case, Crosetti gives his theory on the conspiracy to kill Abraham Lincoln. Lewis wants to flood Memorial Stadium. Bolander expresses an interest in Dr. Blythe; Munch advises and sends flower's in Stan's name. Danvers needs a stronger case; however, Howard is frustrated with a dead end. Then the ghost of the victim leads her to the undiscovered proof. Tim attends Adena's funeral.

Crosetti focuses his investigation into the shooting of Officer Thormann on one suspect, while Lewis continues to investigate. Meanwhile, Pembleton and Bayliss pursue different leads in the murder case of eleven-year-old Adena Watson.

Howard and Felton are in court over the Pony Johnson case, Crosetti and Lewis go head to head with the Secret Service and Bolander and Munch argue over drug legalization. Meanwhile, Pembleton gets an unexpected job offer.

Quitting smoking dominates the conversation ad behavior of the homicide detectives even as they solve what may be a gang-related killing of a 14-year-old boy. Lt. Giardello discovers a secret asbestos removal project on the third floor and confronts his superiors on behalf of his squad.

Gee informs the detectives that they must meet with a sensitivity consultant. Felton protects a friend who's going to help his terminally ill father commit suicide. Pembleton investigates a routine murder that escalates into a case of possible police brutality. Bolander has no intention of meeting with the consultant to the point where he takes a suspension without pay. Lewis investigates the death of the father of Felton's friend and discovers the truth and confronts Beau.

Crosetti's body is found and Bolander is the primary and he thinks the evidence points to suicide. If it is a suicide, there will be no honor guard for the funeral. Refusing to accept the death as a suicide, Meldrick launches his own investigation and tries to thwart Bolander's investigation. Bayliss and Pembleton make arrangements for the funeral reception. Pembleton has reservations about going into the church for the services. Munch works with his brother, an undertaker, to arrange for a coffin. The preliminary ME report shows Crosetti had a blood alcohol level of .25 and wide variety of anti-depressants, The verdict: suicide.

The deputy commissioner invites Pembleton to lunch and gets him to investigate a case involving a congressman. Beau hires a private detective to find Beth and the kids when his clue that they are in Wilmington falls through. Howard and Felton investigate a case of a dead homeless man. Their job is made more difficult when they can't find the body. Lewis and Munch investigate the death of a motorcycle gang member. Pembleton finds out the truth, participates in the cover-up and then resigns when the media gets hold of the real story and the deputy commissioner doesn't back him up.

Bolander, Munch, Howard and Felton all meet to serve a warrant, but Bolander, Howard and Felton are shot in an ambush. Pembleton becomes the primary in the investigation and is partnered with a detective who specializes in the psychology of their prime suspect: a pedophile. Stan's ex-partner Mitch Drummond offers his help. Kay's father and Beau's wife and the kids come to the hospital. A clerical error is discovered to be the cause of why the detectives went to the door marked 201, instead of 210.

The detectives continue chasing their only lead, the child molester. Munch is teamed with Stan's old partner. Beau has no feeling in his foot, but feels guilt about Kay's condition. Stan's ex-wife arrives in town, but has a hard time going to see him at the hospital. Barnfather and Granger want Russert to review Gee and see if he was negligent in his duties regarding the paperwork that led to the shooting. The pedophile is located and it is discovered he was responsible for the strangulation of a young boy, but not the shooting of the three detectives.

Bolander has a relapse. The detectives sound off to the local news about the shooting. Apartment 201 is opened up and the occupant, Gordon Pratt, is a gun freak who once tried to be a cop. Russert and Howard declare a truce. They find the shooter, but lack of a weapon gets him released; later he is found with a bullet in his head.

Beau meets Megan's cousin, NBC's Tim Russert. Kay and Stan return to duty, after Stan undergoes a final test, and Kay finds her desk has been moved. They, like Beau, must both get used to the job again. Tim and Beau investigate the discovery of a skeleton found buried in a backyard. Bolander and Munch discover an unlikely suspect in the murder of a quiet elderly couple: their grandson. Gee exposes Granger, who used his relatives in some department plumbing contracts; the information is leaked to the papers, Granger is forced to retire. Barnfather is made colonel and a new captain is named, Megan Russert. The higher ranks of the Baltimore police department are now more politically correct, but Gee doesn't like it.

A 16-year-old murder case must be reopened when the daughter of the convicted killer holds Col. Barnfather hostage. Pembleton and Bayliss investigate an elderly man whose wife died of drowning in the bathtub. Gee and the newly appointed Capt. Russert clash over the handling of the hostage situation. Bolander, Munch, Howard and Felton must go to the archives to find the records of the case. Lewis meets a strange homeless man who's witnessed the suicide of a man who committed the original murder and the detectives race to overturn the previous conviction. A new ""old"" bartender tries to convince Munch to go with the latest rage, microbreweries. Bolander and Lewis try to connect the suicide victim to the man on death row.

Bolander and Felton are suspended for 22 weeks without pay for incidents related to activities at a police convention in Washington, DC. Howard plans to take the sergeant's exam. Pembleton and Bayliss are assigned to investigate the death of a body found at an arson. At the scene they meet an arson detective that clashes with Frank's working style. Frank hesitates chasing a suspect, and later we learn that his wife is pregnant. Munch also decides to take the exam, and when the wagering begins on who is going to pass, everyone favors Howard. While the detectives are debating whether the fire was set to cover the murder, another fire is started.

Jay Leno stops by the Waterfront Bar while in town visiting his cousin Mary; Munch and Bayliss don't want to bother him. A new year starts out with a clean board and Brodie begins his work taping with the detectives. A sniper takes the city hostage, threatening to and executing people every 8 hours. The sniper uses Hangman as a way to leave clues for the detectives. Bayliss is the primary and his back is giving him trouble as he worries about surgery his doctor wants him to have. To combat the pain, he keeps taking muscle relaxants. A suspect is found and cornered and he shoots himself before they can take him into custody. Russert gets demoted when Barnfather doesn't like the way she handled the investigation.

The sniper continues the shootings and everyone returns to duty lacking sleep. The media starts to make their presence felt. Munch begins to worry about Howard's safety, fearing she'll be wounded again. Frank makes his wife wear a bulletproof vest. Gee asks for Russert's help even though Barnfather had ordered her to stand down during the rest of this investigation. A man at the scene of both of the day's shootings is put into the box for questioning. Russert has a talk with the suspect with the subject being keeping people's attention and respect.

Gee is sent upstairs to see Barnfather and everyone speculates about the vacant Captain's position. Lewis and Kellerman are sent to Pennsylvania to extradite a woman back to Baltimore where she is a suspect in the murder of her husband. Munch tries to find a videotape in Brodie's pile. Later after reviewing the tape, they discover a key piece of evidence isn't contained on the tape. Munch wants the tape erased, but Brodie delivers the tape to court and that results in the outcome Munch feared. On the trip back from Harrisburg, Kellerman convinces Lewis that they have time to stop at Neptune's Castle and they lose the suspect, for a moment. Later they lose her again but find her at the house of her dead husband's mistress, delivering a hat. Much to everyone's surprise but not the viewers Gaffney is promoted to Captain over Gee. Captain Gaffney lays down the law.

A young girl is murdered, in a style similar to Adena Watson's murder. Frank demands to work the case alone as Bayliss begins to think that the two crimes might be related. Bayliss' obsession with trying to get this case solved and linked to Adena's murder causes the two of them to clash. Howard learns that Brodie has a crush on her and tells him she doesn't like the joke that's being pulled-- only problem there is that it's the truth.

Lewis and Kellerman's investigation of a murder in a housing project puts them at odds with a civilian-patrol group, run by the Black Muslims. Munch is excited because Stan is scheduled to come back June 1st. Russert and Munch catch a case where both the victim and shooter are dead. She with Howard must decide whether to circumvent the so-called ""blue wall of silence"" among police officers when it is discovered that the officer on the scene didn't react in time. Barnfather stops Lewis and Kellerman's charging of a Muslim, until something is leaked to the newspapers. The ""big man"" is scheduled to come to the bar, but changes his mind, twice.

Gaffney and Barnfather give Gee a hassle about the return of Frank to duty and the sudden departure of Russert to Europe. Bayliss and Munch are called to the scene of a homicide, where the victim, Mrs. Uba, was cooking breakfast and the only witness may be a male pig named Angie. Frank returns to work and Gee tells him what his limited duties are going to be and that he's called in all his favors and both their asses are on the line. The squad is called out for a hostage situation at a middle school.

Night has fallen and the crisis is no closer to being resolved. Gee demands that Barnfather make a decision. Frank continues to trying to adjust. Frank insists on going to the hostage scene. The identity of the hostage-taker is made when he demands that his pig be brought to the school. When the pig doesn't arrive in time, he sets a fire and seriously wounds a hostage (who later dies) and then becomes badly burned. Brodie takes issue with Munch's treatment of Pembleton. The paperwork gets completed and the hostage-taker is formally charged. Frank makes a decision regarding his recovery.

An article appears in The Baltimore Sun about Kellerman and the other members of the arson unit who are under investigation. Munch investigates the death of women whose husband returned home to find her dead, cause unknown. He suspects the husband but Cox thinks differently. Pembleton tries to help Bayliss close the Lambert case. The article puts Kellerman on edge and he goes to Roland's office where he discovers Roland is a federal witness. This incident gets him suspended until he takes a polygraph test. Brodie gets an offer to stay at Kay's place. Munch presses his witness and breaks him but Cox's evidence still says otherwise. Kellerman takes the test and while waiting for the result tells Lewis the truth. Cox visits Munch's suspect in his cell. Frank reflects on his past and the future. Kellerman passes the polygraph, but so did the federal witness; one of them beat the test.

A new Baltimore Sun reporter gets into the middle of Frank's investigation of the death of a county cop who was shot because of drugs. Gee likes her style. Mike's brothers, Drew and Greg, come to town, who want to take him and his boat to Miami to set up a charter service. Mike learns that they are on the run from a bookie that Drew owes $18,000. To pay that debt, they've stolen Babe Ruth's Baltimore uniform from another bookie with the intent of selling it. Lewis and Cox go in search of the Kellerman boys. They find them in jail where they spent the night after trying to return the uniform.

A man transporting 72 condoms filled with heroin bound for Luther Mahoney is found dead in hotel. The department takes this opportunity to set up ""Operation Get Luther."" The operation almost goes off as planned, except Luther Mahoney gets Lewis' gun and is holding it on him as Kellerman and Stivers enter. Frank and Tim agree to become partners again. Tim stops by to see his uncle. Munch takes a call from a convict who was looking to talk to Bolander. He has information on an old murder case that should be a done deal. That involves the digging up of section C of the parking lot at a racetrack. Munch discovers that the supposed victim is alive; however, he isn't that way for long.

There is a major police chase after an armed suspect, as he holes himself up in a row house that is the headquarters of ARM (African Revival Movement). The head of that house, a former cop, calls in a favor, high in the police department. Munch and Pembleton try to work the case as Bayliss seems to be missing. Their investigation seems to be thwarted every step of the way. Stivers' has second thoughts about what she saw at the Mahoney shooting. An attempt to serve ""Burundi"" Robinson an arrest warrant breaks out into a war between the police and ARM. Gee goes into the house to confront Robinson and finds out who and what he knows.

Bayliss has disappeared again as Pembleton and Brodie make their way to the scene of a shotgun suicide. The victim appears to be Beau Felton. Gee's letter, including information gained in the ""Burundi"" case, begins to make an impact at the highest levels of the department. Frank returns to the department with the news about his case. Lewis goes off, wondering who is going to be next. Det. Falsone comes to the squad with news about why he thinks Beau Felton killed himself. Lewis and Stivers discuss the Mahoney shooting. Cox finds something interesting about the Felton case; she digs in deeper and the results change the case to a murder. Bayliss turns up the next day and disappears again to his Uncle George's place. Pembleton and Howard try to work with Falsone to find Beau's killer. Gee finds out that Beau had been working undercover for the past six months on the Cantwell auto-theft ring. Megan Russert returns from France.

The Wilsons go on television to offer a reward. The newspapers are making the Homicide unit look bad and Barnfather wants quick resolution to the case. The man (and his wife) who gave up Junior Bunk are murdered; Falsone and Lewis investigate. The only survivor, their young son, is brought in to find out what he remembers. His memories-- and a recorded phone message-- lead Stivers to believe a former member of the Narcotics unit is involved. The officer cops to a deal that implicates Georgia Rae Mahoney, though Giardella doesn't want to pursue that yet. Falsone's questioning of the Mahoney shooting leads Cox to doubt her actions at the time of the investigation. Incriminating evidence leads the detectives to Hal Wilson being their prime suspect. Frank goes to interview Felix and Hal Wilson; son and father confront some long-standing issues. Hal's confession is inadmissible in court, the Wilsons leave the Baltimore area, and the case remains officially open.

Kellerman is trying to find Lewis, who's disappeared since his suspension. Bayliss is on vacation. Stivers rotates into homicide and Kellerman isn't happy to see her. A priest is found murdered. Falsone attends a custody deposition hearing. A tape is delivered to Channel 11 that contains some startling information from a Swami about the priest's activities involving young boys. Munch and Kellerman seek out the two boys who were at the scene of the crime; meanwhile the other detectives seek out the Swami. Both are located, though the boys do not provide anything conclusive; they are held in protective custody. Kellerman searches for Lewis. Meanwhile, church members protest in front of the station house. Falsone gets his son for a weekend. Ballard and Gharty detain a corner kid who might be identifiable as one of three who had frightened a priest. Unfortunately, that priest (a monsignor) can't make a positive ID. Because of public pressure, the boys are released from custody to stay with

With the addition of the latest murder, the ""red ball"" investigation continues full force. The detectives and the returning Bayliss pose as priests in an attempt to flush out any leads. Munch's cover attracts two young thugs, but they prove to be nothing. Gee is called upstairs, where his performance doesn't sit well with Barnfather. Lewis turns up and seeks some help from Falsone. Pembleton receives a call that the two missing boys have been found. Pembleton and Stivers travel to collect them. Meanwhile, Gharty and Ballard find the pawnbroker who had accepted a stolen chalice. Cox and Bayliss prevent a drunken Kellerman from driving home. Ballard and Gharty use the pawn-receipt false address to track down the corner kid with whom they'd previously had a run-in. They bring him into the box and Gharty loses his cool. The kid is tough to crack, but Pembleton has an idea involving the morgue and a trip to the shore. While stumbling home, a drunken Kellerman decides he doesn't like the loo

A four-year-old boy is abducted while riding a merry-go-round in the park under the supervision of his mother. The Homicide unit, which helps in the investigation of all child abductions, is called in and Falsone is the primary. When the boy's father has an alibi that checks out, the detectives beginning to check on known pedophiles and later they receive a call from the possible kidnapper. When that doesn't pan out, they start over. The host of a nationwide television program, This Weeks Wanted, suggests that they hypnotize the little girl who was riding on the horse next to the boy. Hypnosis reveals a partial plate number and that leads to a lucky break. Ballard and Stivers discuss motherhood and Falsone checks on his son.

Munch and Gharty probe the death of a high-school athlete who appeared to have everything going for him. Pembleton and Bayliss have only one lead to a potential suspect, a pager number; however, Bayliss has a plan that should lead to the apprehension of their suspect. Kellerman and Ballard get a case with a drug dealer that Kellerman is less than enthusiastic to work. The victim is one of Georgia Rae Mahoney's lieutenants and there are four other unsolved murders in the last two weeks where the victims were members of the Mahoney organization. Pembleton and Bayliss apprehend the wrong suspect, but the fact the suspect was trafficking 200 Kg of narcotics gets them a commendation. Meanwhile, using the information provided to him by Falsone, Lewis has had members of the Mahoney organization under surveillance. Is Lewis involved in these murders? Kellerman receives some good news for a change; passing a tape of his conversation with Judge Gibbons onto the FBI won't be necessary. The FBI is

Judge Gibbons has been stabbed. On their way to the crime scene, Bayliss and Pembleton talk about a book that Bayliss is reading, then Pembleton wonders if anyone would ever write a book about their Homicide unit. A probation officer is murdered in a drive-by shooting. The FBI gets involved with investigation of the Gibbons death. Agent Bauer mentions to Bayliss that Kellerman's confrontation with Gibbons probably got the judge killed. He wants Kellerman clear of the case. A fingerprint lifted from the Gibbons' crime scene points to Georgia Rae's son, Junior Bunk. Falsone and Stivers get a lead on their probation officer shooting case. As Junior Bunk is brought in for questioning, he eyeballs a handgun being put in a drawer. Pembleton and Bayliss get Junior in the box and he is no longer able to be intimidated. While waiting to be transferred to central booking, Kellerman, Lewis & Gharty harass Junior. Slightly freed up to make a phone call, Junior gets the gun out of the desk and begi

The search for Georgia Rae and the war against her organization begin. Stivers, uncomfortable with the whole situation tells Gee about the Luther Mahoney shooting. Ballard and Gharty begin to deal with their recovery. A lead on Georgia Rae's whereabouts is uncovered. During the assault on the building, Georgia Rae's body is found and Bayliss takes a bullet that would have hit Pembleton. Gee asks Pembleton to get to heart of the Luther Mahoney shooting that started it all. Pembleton and Falsone start with Lewis and then they move onto Kellerman. The truth about the shooting comes out and Kellerman claims sole responsibility, Pembleton asks him for his badge. To protect Stivers and Lewis from prosecution, Kellerman resigns. Feeling remorse for the hesitation that caused Bayliss to take a bullet for him and with Gee's plans to cover-up the truth about the Luther Mahoney shooting, Pembleton decides it is time to resign.

A woman brings to the homicide unit her mystery-writer husband's videotaped declaration that his literary agent is responsible for his murder. Ballard and Gharty catch the case -- only there is no body or crime scene. Meanwhile, Munch and Bayliss investigate the death of an elderly woman that occurred during a break-in -- was it a homicide? Munch would rather leave for his weekend rendezvous with Billie Lou. Ballard and Gharty's investigation becomes a red-ball as they find evidence in the writer's office that a crime was committed. A break leads to the arrest of the literary agent and his accomplice, although Danvers can't guarantee a conviction. Falsone asks Ballard if she would like to go out Saturday night; just then the jury comes back. And a sharp-eyed juror insures that justice is done.

A white bus driver striking a black female pedestrian sparks a riot. The driver is killed, and some distance away from the riot another body is found. MGee and Gharty look into the death of the driver while Lewis and Sheppard look into death of the other body. Lewis finds a clue at the scene, a button (later discovered to be missing from a police uniform). Gharty and MGee actively debate whether race was the motivation for the driver's beating death; MGee suspects the incident wasn't racially motivated. The bus riders are interviewed to find out what they know. Lewis and Sheppard approach a house looking for their witness (without backup). For her trouble Sheppard keeps hold of her suspect, but loses her gun and is severely beaten. Ballard is recalled from her hiking vacation. Lewis lays down the law for the residents of ""Little Jamaica""; he wants Sheppard's gun returned tonight. The witness Sheppard caught identifies Hellriegel as the murderer, and the men who beat the driver to death

The Internet is stage for a ritual murder, which was staged -- which was staged, or was it? The body is found the following morning and Sheppard takes the call, her first since the beating. Since Lewis can't be found, she partners with Bayliss. Second shift detectives Bonaventura and Austin catch word of the day shift's case. It seems the victim in Sheppard's case was a witness they had interviewed the day before about an online murder hoax. The detectives are informed about another murder that is scheduled for midnight. It's a red ball. The detectives try to put the clues together, but come up with nothing and must wait until the netcast begins before they can trace the killer. The trace is successful, but when they arrive at the scene, the killer has left them a computer with the words ""Ha Ha Fooled You."" Barnfather wants Bayliss reassigned as primary if something doesn't turn up soon. Sheppard goes online to flush out the killer. He advertises another murder will take place at www.i

Danvers brings news of his appointment to the District Court bench as the investigation of a government official named Janine McBride continues in New York. Their prime suspect Chesley Purcell is dead and her shooter is in the hands of the Feds. The Baltimore detectives investigate the background of Chesley Purcell and it turns up the name of a man in prison who still appears to be running his organization.

This crossover starts on Law and Order S09E14 Sideshow (I).

In Stivers and Falsone's case, a man is found shot dead in his bed, with no signs of a struggle. Gee lobbies Barnfather to find a way to get them the ability to have some control over their FBI liaison, so they don't experience the same problems they had with the Janine McBride case. Barnfather lets Gee know that there is Captain's position opening up and he should be inline for it with no catches. Lewis lets Ballard accompany him on a bar stabbing, when she accuses him of being afraid to work with a female, since the incident with Sheppard. While she does get to help him with the initial investigation, Lewis manages to work the rest of the case on his own, leaving her to handle the details. Meanwhile, Ballard's usual partner Gharty spends a ""mental health day"" at the Waterfront Bar, drinking and proposing to Billie Lou. Stivers and Falsone discover their victim had a bad breakup with his ex-wife Eleanor Burke, and she admits to committing the crime; however, as an assistant US attorne