A CIA mission sends Harm & Beth O'Neil to Libya to pull an agent out of that country. But when the agent wants Harm to transport the entire family, Harm has to modify his mission while avoiding contact with the Libyan authorities. When that fails and their plane comes under attack, Harm & Beth must land on the only available landing strip...the U.S.S. Seahawk.

At JAG, a Marine is accused of being involved with the Al-Queda terrorist organization and Mac is assigned to defend him against the charge.

A soldiers finds himself being investigated when his claim of killing an Iraqi prisoner makes the news.

During the all-star game of the Navy & Marine baseball players, a batter narrowly escapes being killed after being hit by a ball thrown at him by the pitcher. The pitcher then comes under scrutiny for possible assault charges.

The crash of an aircraft into an aircraft carrier is believed to be the result of the pilot committing suicide, which has Harm & Mac squaring off against one another; especially as Mac wants to hold the pilots commanding officer responsible when she learns he knew the pilot was deeply depressed before the pilot took off.

When Mattie gets in over her head, she needs Harm & Petty Officer Coates to help her get out of it.

Cmdr. Turner defends himself against the complaint filed against him for displaying anti-Korean attitudes when assigned to deal with the SARS outbreak earlier.

Harm & Mac go up against one another in the case of a Marine General making public speeches stating Islam goes hand-in-hand with evil & terrorism.