Birdy and Tsutomu try to cope with existing by sharing one body, but leading two separate lives. Birdy's commanding officer, Magius, informs Tsutomu that his original body's being restored and it will be some time before he can live outside of Birdy's body. Bacillus tries to eliminate Birdy by luring her into a movie shooting as cover. Keisuke Muroto tries to take photos of Bacillus and Birdy, but falls unconscious when he was knocked out by debris. A wounded Bacillus took over Geegar's Earth body as his first one was damaged from deterioration and from fighting Birdy.

Nakasugi invites her friends including Tsutomu to her family village in the Sawajiri Village in Nagano. But on one evening, Nakasugi succumbs to the Riunka implanted on her by an unknown force who returned the renegade marionette back to her owners. A small number of Riunka explosions rattled the village, forcing local police and the JGSDF to mobilize.

Birdy tracks down the illegal Virtual Reactor Chips purchaser, who is Nataru's father, Mr. Dusk. Dusk reveals he is a member of an Alterian freedom group, and that he helped disguise the escapees. Birdy goes after the nearest, but the escapees kidnap Dusk and interrogate him on the attacks on their number. He is murdered, which angers Nataru and upsets Birdy. Nataru kills another of the escapees, but not before learning Valic killed his father. Birdy promises to catch Dusk's killer.