The ship is caught in a storm and Naruto uses his shadow clones to protect the ship.After the storm, Naruto wakes up and a quarrel begins between Naruto and his Shadow clones. Soon his shadow clones revolt and take control of the ship and the crew is forced to land on a nearby island. Naruto is taken hostage by the shadow clones and they put forth their demands to him. Naruto is saved by Yamato and the others only to find that it was a dream. It was caused when a Shadow clone was released and the memories of it returned to Naruto. Naruto then realizes the worth of his clones and releases them.

Konan encloses Tobi in an chasm with a large amount of explosive tags that detonates in a wide area. Tobi manages to survive with his Izanagi techique, sacrificing one eye, and pierces Konan behind. Tobi explains his technique to Konan. Konan refuses to give up and continues to fight Tobi. Tobi manages to subdue her and places Konan inside a genjutsu to force her to reveal the location of the Rinnegan. Tobi travels to the location and retrieves Nagato's corpse and then takes his leave. A bloodied piece of paper is blown of Konan's body by the wind and travels to her childhood hideout. As it travels, more of the Ame Orphans past with Jiraiya is revealed, as well as some of their time as the original Akatsuki. Meanwhile, Tobi, with a new outfit, is told by Zetsu that they have received intel on the Nine-Tails wherabouts from Kisame. He declares that it's time to capture the Nine-Tails.

Part Four of the Four Week Long Special Project for the Broadcast's Tenth Anniversary - Naruto is determined to save Sasuke, who has deserted the Hidden Leaf.

Ino sees Sakura falling from the sky. Although she manages to save her, the shock of the fall has left Sakura with amnesia.

Naruto and Killer Bee engage in battle against the reanimated Itachi Uchiha and Nagato. Itachi learns from Naruto that Sasuke has chosen the path of vengeance.

Three years ago, Leaf Anbu Yugao Uzuki lost her lover Hayate Gekko in battle. Unable to cope with his death, Yugao has since left the Anbu and joined the Medical Corps. Meanwhile, Kabuto has reanimated Hayate.

Kabuto reanimates an army of unknown shinobi led by Danzo’s former bodyguard Torune to retrieve the ones he lost to the Allied Forces. But aside from Torune, the reanimated shinobi are all weak and are quickly sealed away.

The power of the reanimated Madara Uchiha far exceeds what the Allied Forces expected. Despite the difference in power, the Third Tsuchikage, Ohnoki, along with Naruto and Gaara, refuses to give up.

Tsunade leaves her post as Medic Ninja to join the other Kage in fighting Madara. Meanwhile, Sasuke goes after Itachi and learns that his brother intends on stopping Kabuto’s Reanimation Jutsu.

Kakashi discovers a strange connection between the masked man’s Transportation Technique and his own Kamui Jutsu. Naruto throws everything he’s got against the masked man and breaks his mask, finally revealing his identity!

The Anbu who attack Naruto and Shikamaru are agents sent by Danzo, who had promised Orochimaru that he would deliver Sasuke safely to him. Luckily, Neji, Lee and Tenten rush to their aid in the nick of time! Meanwhile, Hiruko reveals the truth behind the incident involving Hizashi