Milia is now aboard the Macross as a spy and marvels at human culture. The premiere of Minmay's film Shao Pi Long (Little White Dragon) takes place. A Zentradi attack prompts another transformation to combat mode, and Hikaru and Misa end up being trapped within the walls of the ship, where they end up learning more about each other. Milia continues to search for the miclone pilot who defeated her.

A epic battle for the Earth takes place when Boddole Zer's main fleet of over 4,000,000 warships fold above Earth's atmosphere. Using the power of song from Lynn Minmay, the Macross, along with its allied Zentradi fleet, attempts a daring last stand to Boddole Zer's forces. Heroes will die, a world may fall, but will love prevail?